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  1. Woods Hole Open Access Server

    Title: Phenotypic plasticity in sand dollars in response to predators at the Friday Harbor Laboratories, WA, USA and in sea urchins from Southern Maine, USA from 2018 to 2019

    Dataset 2022-12-03

    Contributors:
    Subjects:
    • echinoderm
    • phenotypic plasticity
    • predator
    • larvae
    • juvenile
    Summary: This dataset describes phenotypic plasticity in sand dollars in response to predators at the Friday Harbor Laboratories, WA, USA and in sea urchins from Southern Maine, USA from 2018 to 2019. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/877780

  2. Zenodo

    Title: bolliger32/gpl-covid: medRxiv update 2

    Software 2020

    Contributors:
    Subjects:
    • COVID-19
    Summary:

    Data and code to accompany The Effect of Large-Scale Anti-Contagion Policies on the COVID-19 Pandemic

  3. Zenodo

    Title: Compositional Epidemiology of COVID-19

    Software 2020

    Contributors:
    Summary:

    This repository contains the models and data used for our work on modelling COVID-19 in a compositional manner.

    This work combined existing work on SEIR modelling for COVID-19 with controller models which captured government interventions. This allows for the evaluation of complex control strategies in closed loop with epidemiological models.

  4. Zenodo

    Title: PRETgroup/ccpe-covid19: Second Wave Modelling

    Software 2020

    Contributors:
    Summary:

    Models have been updated to accurately capture the second wave modelling in both Italy and New Zealand.

    This includes the creation of a new plant model which allows for external factors to initiate the second wave.

  5. Woods Hole Open Access Server

    Title: Photo of John Lochhead and Barbara Little on Collecting Trip, 1988

    Still image

    Contributors:
    Subjects:
    • People

  6. Zenodo

    Title: bolliger32/gpl-covid: 0.4.1

    Software 2020

    Contributors:
    Subjects:
    • COVID-19
    Summary:

    Governments around the world are responding to the novel coronavirus (COVID-19) pandemic \cite{wu2020new} with unprecedented policies designed to slow the growth rate of infections. Many actions, such as closing schools and restricting populations to their homes, impose large and visible costs on society, but their benefits cannot be directly observed and are currently understood only through process-based simulations. Here, we compile new data on 1,717 local, regional, and national non-pharmaceutical interventions deployed in the ongoing pandemic across localities in China, South Korea, Italy, Iran, France, and the United States (US). We then apply reduced-form econometric methods, commonly used to measure the effect of policies on economic growth, to empirically evaluate the effect that these anti-contagion policies have had on the growth rate of infections. In the absence of policy actions, we estimate that early infections of COVID-19 exhibit exponential growth rates of roughly 38% per day. We find that anti-contagion policies have significantly and substantially slowed this growth. Some policies have different impacts on different populations, but we obtain consistent evidence that the policy packages now deployed are achieving large, beneficial, and measurable health outcomes. We estimate that across these six countries, interventions prevented or delayed on the order of 62 million confirmed cases, corresponding to averting roughly 530 million total infections. These findings may help inform whether or when these policies should be deployed, intensified, or lifted, and they can support decision-making in the other 180+ countries where COVID-19 has been reported.

  7. Zenodo

    Title: Golo 1.0.0

    Software 2014

    Contributors:
    Summary:

    Golo version 1.0.0.

  8. Woods Hole Open Access Server

    Title: Oyster density of restored reef edge/interior in Quonochontaug Pond, RI in May 2019

    Dataset 2022-11-02

    Contributors:
    Subjects:
    • Eastern oyster
    • density
    • reef
    • Restoration
    Summary: This dataset represents oyster density measurements of restored reef edge/interior in Quonochontaug Pond, Rhode Island, USA determined by scuba divers in May of 2019. Reef relief and quadrat relief were calculated by subtracting water depth at each quadrat (quadrat relief) or the highest point on the reef (reef relief) from water depth on the adjacent unstructured bottom. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/881536

  9. Woods Hole Open Access Server

    Title: Abundance and proportion of ichthyoplankton of the Northeast U.S. Shelf from surveys conducted during the MARMAP (1977-1987) and EcoMon (1999-2008) programs.

    Dataset 2020-01-14

    Contributors:
    Summary: Abundance and proportion of ichthyoplankton of the Northeast U.S. Shelf. Ichthyoplankton data from several surveys conducted during the Marine Resources Monitoring, Assessment, and Prediction (MARMAP; 1977-1987) and Ecosystem Monitoring (EcoMon; 1999-2008) programs. The Northeast Fisheries Science Center (NEFSC) has conducted several ichthyoplankton collection programs on the NEUS Shelf over the past forty years including the Marine Resources Monitoring, Assessment, and Prediction program (MARMAP, 1977 - 1987) and Ecosystem Monitoring (EcoMon, 1999 - present) program (Richardson et al. 2010). Both MARMAP and EcoMon were designed as multi-species plankton surveys, and sampling effort covered the entire NEUS Shelf from Cape Hatteras, North Carolina, to Cape Sable, Nova Scotia (Figure 1, Sibunka and Silverman 1984, 1989; Richardson et al. 2010). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/560448

  10. Woods Hole Open Access Server

    Title: Database summarizing independent studies of nekton taxa associated with oyster reefs

    Dataset 2021-03-25

    Contributors:
    Summary: This dataset summarizes independent studies of nekton taxa associated with oyster reefs off of the Atlantic and Gulf Coasts of the United States. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/845755

  11. Woods Hole Open Access Server

    Title: EcoMon plankton counts (10-m2) from Bongo tows, including MARMAP data from multiple cruises in the Northeast Continental Shelf of the United States from 1977-2015 (EcoMon Zooplankton project)

    Dataset 2021-02-24

    Contributors:
    Summary: Zooplankton data are the number of organisms beneath 10 m^2 of sea surface from several surveys including: ICNAF, MARMAP, HERRING, ECOMON as well as perhaps several others, and hundreds of cruises. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/3327

  12. Woods Hole Open Access Server

    Title: Daily temperature measurements on restored oyster reefs in Quonochontaug Pond, RI from July-August 2018 and September-October 2018

    Dataset 2022-11-02

    Contributors:
    Subjects:
    • water temperature
    • reef
    • Restoration
    • Eastern oyster
    Summary: Daily temperature measurements were collected on restored oyster reefs in Quonochontaug Pond, Rhode Island, USA in the summer (July-August) 2018 and the fall (September-October) of 2018. Bottom water temperatures were collected hourly during tray deployment using one Onset Tidbit v2 HOBO temperature logger per block in summer 2018 and one logger at both the edge and interior of 3 reefs (one per block) in fall 2018. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/881834

  13. Woods Hole Open Access Server

    Title: Abundance and proportion of adult fish species of the Northeast U.S. Shelf; bottom trawl surveys were conducted by the Northeast Fisheries Science Center (NEFSC) during 1977-1987 and 1999-2008

    Dataset 2020-01-14

    Contributors:
    Summary: Abundance and proportion of adult fish species of the Northeast U.S. Shelf; bottom trawl surveys were conducted by the Northeast Fisheries Science Center (NEFSC) during 1977-1987 and 1999-2008. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/560342

  14. Zenodo

    Title: Mechanistic Transmission Modeling of COVID-19 on the Diamond Princess Cruise Ship

    Other 2020

    Contributors:
    Summary:

    We developed a framework that combines stochastic Markov chain and negative exponential dose-response modeling with available empirical data on mechanisms of SARS-CoV-2 dynamics and human behaviors, which informs a modified version of the Reed-Frost epidemic model to predict daily and cumulative daily case counts on the Diamond Princess Cruise Ship. 

  15. Zenodo

    Title: bolliger32/gpl-covid 0.4.2

    Software 2020

    Contributors:
    Subjects:
    • COVID-19
    Summary:

    Data and code to accompany The Effect of Large-Scale Anti-Contagion Policies on the COVID-19 Pandemic

  16. Zenodo

    Title: golo-lang: Golo 1.1.0

    Software 2014

    Contributors:
    Summary:

    Golo 1.1.0, with:

    • Python-style decorators,
    • CLI improvements,
    • ctags generation,
    • many fixes.

  17. Woods Hole Open Access Server

    Title: Results from metal limitation experiments (Cu, Zn, Fe, Mn) conducted in the prymensiophyte Phaeocystis globosa carried out in the Kustka and Allen labs at Rutgers in Newark, NJ from 2007-2011

    Dataset 2019-02-22

    Contributors:
    Summary: Results from metal limitation experiments (Cu, Zn, Fe, Mn) conducted in the prymensiophyte Phaeocystis globosa carried out in the Kustka and Allen labs at Rutgers in Newark, NJ from 2007-2011 For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/3669

  18. Woods Hole Open Access Server

    Title: Results of measurements of the oxidation of 15N supplied as ammonia, urea, putrescine or nitrite in samples collected from continental shelf waters west of the Antarctic Peninsula on cruise LMG1801 from January to February 2018

    Dataset 2021-04-08

    Contributors:
    Summary: This dataset includes the results of measurements of the oxidation of 15N supplied as ammonia, urea, putrescine or nitrite in samples collected from continental shelf waters west of the Antarctic Peninsula of cruise LMG18-01. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/840629

  19. Woods Hole Open Access Server

    Title: Results of measurements of the oxidation of 15N supplied as ammonia, urea, putrescine or nitrite in samples collected from continental shelf waters west of the Antarctic Peninsula on cruise LMG1801 from January to February 2018

    Dataset 2021-10-12

    Contributors:
    Summary: This dataset includes the results of measurements of the oxidation of 15N supplied as ammonia, urea, putrescine or nitrite in samples collected from continental shelf waters west of the Antarctic Peninsula of cruise LMG18-01. For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/840629

  20. Woods Hole Open Access Server

    Title: John Dowling discusses George Wald and H. Keffer Hartline

    Moving image 2015-04-09

    Contributors:
    Subjects:
    • Wald, George
    • Hartline, Haldan Keffer
    • People
    • Local Area