Title: Mappability of the mouse and human genomes and methylomes with Umap and Bismap

Type Dataset Karimzadeh, Mehran, Ernst, Carl, Kundaje, Anshul, Hoffman, Michael M. (2017): Mappability of the mouse and human genomes and methylomes with Umap and Bismap. Zenodo. Dataset. https://zenodo.org/record/800645

Authors: Karimzadeh, Mehran (Department of Medical Biophysics, University of Toronto, Toronto, Ontario, Canada) ; Ernst, Carl (Department of Human Genetics, McGill University, Montreal, Quebec, Canada) ; Kundaje, Anshul (Department of Computer Science, Stanford University, Stanford, California, USA) ; Hoffman, Michael M. (Princess Margaret Cancer Centre, Toronto, Ontario, Canada) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

This dataset consists of single-read mappability (Bed files) and multi-read mappability (Wiggle files) of human and mouse genomes and methylomes (bisulfite-converted genome). We provide mappability information for the two most recent assemblies of each organism, and for four different read lengths (24 bp, 36 bp, 50 bp, and 100 bp).

More information

• DOI: 10.5281/zenodo.800645

Subjects

• Umap, Bismap, mappability, bisulfite sequencing

Dates

• Publication date: 2017
• Issued: May 30, 2017

Notes

Rights

• https://opensource.org/licenses/GPL-3.0 GNU General Public License v3.0 only
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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