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Title: pyMosaic 0.2.0

Type Software Hinsen, Konrad (2014): pyMosaic 0.2.0. Zenodo. Software. https://zenodo.org/record/7648

Author: Hinsen, Konrad (CNRS) ;

Links

Summary

MOSAIC is a modular data model for molecular simulation applications

pyMosaic is a Python library that provides an in-memory representation of MOSAIC data items plus input/output in HDF5 and XML formats. A command-line tool provides conversion between the HDF5 and XML representations as well as data import from the Protein Data Bank (PDB).

This file is an ActivePapers edition of pyMosaic 0.2.0. ActivePapers is a computational science framework that supports reproducible research and publishing computations. An ActivePaper can contain any combination of code, data, and documentation. The pyMosaic ActivePaper is a code library with documentation. It can be referenced by other ActivePapers that contain molecular simulation data in Mosaic HDF5 format.

For further information, see

The pyMosaic Web site: http://pypi.python.org/pypi/pyMosaic The MOSAIC Web site: http://mosaic-data-model.github.io/ The ActivePapers Web site: http://www.activepapers.org/

More information

  • DOI: 10.5281/zenodo.7648

Subjects

  • ActivePapers, MOSAIC, Python, molecular simulation

Dates

  • Publication date: 2014
  • Issued: January 06, 2014

Rights


Much of the data past this point we don't have good examples of yet. Please share in #rdi slack if you have good examples for anything that appears below. Thanks!

Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsSupplementTohttps://doi.org/10.1021/ci400599y
IsSupplementTohttp://pypi.python.org/pypi/pyMosaic
IsSupplementTohttp://mosaic-data-model.github.io/
IsPreviousVersionOfhttps://doi.org/10.5281/zenodo.10735
IsPartOfhttps://zenodo.org/communities/zenodo