Title: Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues

Type Software Florea, Liliana, Song, Li, Salzberg, Steven L (2013): Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues. Zenodo. Software. https://zenodo.org/record/7068

Authors: Florea, Liliana (Johns Hopkins University School of Medicine) ; Song, Li (Johns Hopkins University) ; Salzberg, Steven L (Johns Hopkins University School of Medicine) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

Software and associated data from the paper, including: ASprofile software (ASprofile.tar.gz); Exon skipping events with annotations (BodyMap.exon_skipping.tbl); Concatenated GTF transcript file for the 16 tissues (BodyMap.ens61.0.0.gtf.gz); (All) Events extracted from pairwise transcript comparisons (BodyMap.ens61.0.0.as.gz); Expression (FPKM) values for exon skipping events in the 16 tissues (BodyMap.fpkms.tar.gz); and Supporting summary data (Excel) for the alternative splicing analyses (BodyMap.xls).

More information

• DOI: 10.5281/zenodo.7068

Subjects

• alternative splicing, exon skipping, RNA-seq

Dates

• Publication date: 2013
• Issued: August 31, 2013

Rights

• https://opensource.org/licenses/GPL-2.0 GNU General Public License v2.0 only
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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