Title: immunomind/immunarch: Immunarch 0.7.0

Type Software Aleksandr Popov (2022): immunomind/immunarch: Immunarch 0.7.0. Zenodo. Software. https://zenodo.org/record/6984421

Author: Aleksandr Popov (Immunomind) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

New function repSomaticHypermutation() to calculate number of mutations against the germline for each clonotype Visualization for repGermline() beta: for now, specific clonotypes can be highlighted on the tree only by manually changing values in Type column All repGermline() options are now starting with . point repGermline(): .ref_only_first argument removed, because alleles are already unique for each species New repGermline() option .align_j_gene for more precise (but slower) germline calculation Updated tutorials Various updates for texts and documentation Various bugfixes in BCR pipeline

More information

• DOI: 10.5281/zenodo.6984421

Dates

• Publication date: 2022
• Issued: August 11, 2022

Rights

• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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