Title: immunomind/immunarch: Immunarch 0.6.8

Type Software Aleksandr Popov, ivan-immunomind, MVolobueva, Vadim I. Nazarov, immunarch.bot, Eugene Rumynskiy, gracecodeadventures, tsvvas, Maksym Zarodniuk (2022): immunomind/immunarch: Immunarch 0.6.8. Zenodo. Software. https://zenodo.org/record/6524612

Authors: Aleksandr Popov (Immunomind) ; ivan-immunomind ; MVolobueva ; Vadim I. Nazarov (ImmunoMind) ; immunarch.bot ; Eugene Rumynskiy (Immunomind) ; gracecodeadventures ; tsvvas ; Maksym Zarodniuk ;

Links

• Item record in Zenodo
• Digital object URL

Summary

BCR pipeline implementation: seqDist(), seqCluster(), repGermline(), repAlignLineage() and repClonalFamily() functions New example data for BCR: small version can be loaded with data(bcrdata), large version is available on this page in Resources MiXCR parser in repLoad() now loads C genes, CDR3 begin/end coordinates and number of insertions/deletions in V and J genes Added parameter for vis_heatmap(): .axis.text.size Various bugfixes in code and documentation

More information

• DOI: 10.5281/zenodo.6524612

Dates

• Publication date: 2022
• Issued: May 06, 2022

Rights

• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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