Title: nf-core/viralrecon: nf-core/viralrecon v2.4 - Magnesium Marmoset

Type Software Harshil Patel, Sarai Varona, Sara Monzón, Jose Espinosa-Carrasco, Michael L Heuer, Anthony Underwood, Gisela Gabernet, nf-core bot, Phil Ewels, MiguelJulia, Stephen Kelly, Erika, Katrin Sameith, Maxime U. Garcia, jcurado, Kevin Menden (2022): nf-core/viralrecon: nf-core/viralrecon v2.4 - Magnesium Marmoset. Zenodo. Software. https://zenodo.org/record/6220704

Authors: Harshil Patel (Seqera Labs) ; Sarai Varona ; Sara Monzón (BU-ISCIII) ; Jose Espinosa-Carrasco ; Michael L Heuer (UC Berkeley AMPLab/RISE Lab) ; Anthony Underwood ; Gisela Gabernet (@qbicsoftware) ; nf-core bot ; Phil Ewels (Science for Life Laboratory) ; MiguelJulia ; Stephen Kelly ; Erika (Carlos III Health Institute) ; Katrin Sameith (DRESDEN-concept Genome Center) ; Maxime U. Garcia (@SciLifeLab | Karolinska Institutet) ; jcurado (@Flomics) ; Kevin Menden (QBiC) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

[2.4] - 2022-02-22 Enhancements & fixes nf-core/tools#1415 - Make --outdir a mandatory parameter [#281] - Nanopore medaka processing fails with error if model name, not model file, provided [#286] - IVAR_VARIANTS silently failing when FAI index is missing Parameters Old parameter New parameter --publish_dir_mode

NB: Parameter has been updated if both old and new parameter information is present.

NB: Parameter has been added if just the new parameter information is present.

NB: Parameter has been removed if new parameter information isn't present.

More information

• DOI: 10.5281/zenodo.6220704

Dates

• Publication date: 2022
• Issued: February 22, 2022

Rights

• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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