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Title: BridgeDb: Human and SARS-related corona virus gene/protein mapping database derived from Wikidata

Type Dataset Kutmon, Martina, Willighagen, Egon (2021): BridgeDb: Human and SARS-related corona virus gene/protein mapping database derived from Wikidata. Zenodo. Dataset. https://zenodo.org/record/5734440

Authors: Kutmon, Martina (Maastricht University) ; Willighagen, Egon (Maastricht University) ;

Links

Summary

Gene/Protein mappings for human and SARS-related coronaviruses. Data is derived from Wikidata. Mappings from Wikidata to NCBI Gene, RefSeq, UniProt, and Guide to Pharmacology Target are provided in the .bridge file.

179 Wikidata (Wd) identifiers 82 Uniprot-TrEMBL (S) identifiers 70 NCBI Gene (L) identifiers 66 RefSeq (Q) identifiers 9 Guide to Pharmacology Target (Gpt) identifiers

Virus name was added as attribute ("virus") to Wikidata Xrefs.

More information

  • DOI: 10.5281/zenodo.5734440

Subjects

  • BridgeDb, identifier mapping, coronavirus

Dates

  • Publication date: 2021
  • Issued: November 27, 2021

Notes

Other: License: Creative Commons CC0

Rights

  • info:eu-repo/semantics/openAccess Open Access

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Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsVersionOfhttps://doi.org/10.5281/zenodo.3735704
IsPartOfhttps://zenodo.org/communities/bridgedb
IsPartOfhttps://zenodo.org/communities/covid-19
IsPartOfhttps://zenodo.org/communities/zenodo