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Title: hsmaan/CovidGenotyper: CGT v0.2.3

Type Software Hassaan Maan, Natalie Knox (2020): hsmaan/CovidGenotyper: CGT v0.2.3. Zenodo. Software. https://zenodo.org/record/4273149

Authors: Hassaan Maan ; Natalie Knox ;

Links

Summary

Release 0.2.3 of the Covid-19 Genotyping Tool. Updates include:

Downsampling GISAID sequences to 20'000, using sequences processed from June onwards Travel history metadata Stricter sequence quality thresholds More stable UMAP projection Minor UI changes McMaster mirror (https://bergen.mcmaster.ca/covidgenotyper/)

More information

  • DOI: 10.5281/zenodo.4273149

Dates

  • Publication date: 2020
  • Issued: November 13, 2020

Rights

  • info:eu-repo/semantics/openAccess Open Access

Much of the data past this point we don't have good examples of yet. Please share in #rdi slack if you have good examples for anything that appears below. Thanks!

Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsSupplementTohttps://github.com/hsmaan/CovidGenotyper/tree/v0.2.3
IsVersionOfhttps://doi.org/10.5281/zenodo.3832305
IsPartOfhttps://zenodo.org/communities/covid-19
IsPartOfhttps://zenodo.org/communities/zenodo