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Title: Dataset and images for "Instantaneous R calculation for COVID-19 epidemic in Brazil"

Type Dataset Félix. Francisco H. C., Fontenele, Juvenia Bezerra (2020): Dataset and images for "Instantaneous R calculation for COVID-19 epidemic in Brazil". Zenodo. Dataset. https://zenodo.org/record/3819284

Authors: Félix. Francisco H. C. (Pediatric Cancer Center, Hospital Infantil Albert Sabin) ; Fontenele, Juvenia Bezerra (Department of Pharmacy, Universidade Federal do Ceará) ;

Links

Summary

This dataset was generated from raw data obtained at 

Ceará State - https://indicadores.integrasus.saude.ce.gov.br/api/casos-coronavirus/export-csv São Paulo State - http://www.seade.gov.br/wp-content/uploads/2020/04/Dados-covid-19-estado.csv Brazil - https://covid.saude.gov.br/

Data was processed with R package EpiEstim (methodology in the associated preprint). Briefly, instantaneous R was estimated within a 5 day time window. Prior mean and standard deviation values for R were set at 3 and 1. Serial interval was estimated using a parametric distribution with uncertainty (offset gamma). We compared the results at two time points (day 7 and day 21 after the first case was registered at each region) from different brazillian states in order to make inferences about the epidemic dynamics.

More information

  • DOI: 10.5281/zenodo.3819284

Subjects

  • COVID-19, instantaneous R, Brazil

Dates

  • Publication date: 2020
  • Issued: April 29, 2020

Rights


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Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsSupplementTohttps://doi.org/10.1101/2020.04.23.20077172
IsDerivedFromhttps://indicadores.integrasus.saude.ce.gov.br/api/casos-coronavirus/export-csv
IsDerivedFromhttp://www.seade.gov.br/wp-content/uploads/2020/04/Dados-covid-19-estado.csv
IsDerivedFromhttps://covid.saude.gov.br/
IsVersionOfhttps://doi.org/10.5281/zenodo.3819283
IsPartOfhttps://zenodo.org/communities/covid-19
IsPartOfhttps://zenodo.org/communities/zenodo