Title: Illumina reads SARS-Cov-2 using amplicon enrichment

Type Dataset Maria Iglesias-Caballero, Sara Monzon, Sarai Varona, Isabel Cuesta, Inmaculada Casas (2020): Illumina reads SARS-Cov-2 using amplicon enrichment. Zenodo. Dataset. https://zenodo.org/record/3746584

Authors: Maria Iglesias-Caballero (ISCIII) ; Sara Monzon (ISCIII) ; Sarai Varona (ISCIII) ; Isabel Cuesta (ISCIII) ; Inmaculada Casas (ISCIII) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

Testing data for nf-core/viralrecon pipeline

.Here we share two samples with illumina reads obtained from a enrichment experiment using Artic network amplicons V1 for SARS-Cov-2 virus. We also share the fasta and bed file with the localization of the primers in the virus genome.

The library has been constructed performing the next steps:

- Amplicon creation.

- Illumina library generation. No fragmentation, only adaptor and indexes.

- MiSeq 2x300 sequencing.

More information

• DOI: 10.5281/zenodo.3746584

Subjects

• illumina, amplicons, sars-cov-2

Dates

• Publication date: 2020
• Issued: March 31, 2020

Rights

• https://creativecommons.org/licenses/by/4.0/legalcode Creative Commons Attribution 4.0 International
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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