Title: Analysis of correlation-based biomolecular networks from different omics data by fitting stochastic block models
Type Dataset Baum, Katharina, Rajapakse, Jagath C., Azuaje, Francisco (2019): Analysis of correlation-based biomolecular networks from different omics data by fitting stochastic block models. Zenodo. Dataset. https://zenodo.org/record/3363060
Links
- Item record in Zenodo
- Digital object URL
Summary
Baum_et_al_2019_Supplementary_Figures.pdf: Supplementary Figures S1-S4. Legends are included under each figure.
sbm-for-correlation-based-networks-master.zip: Archived source code of R and Python functions for the analyses and example workflow description at time of publication. Files are maintained at https://gitlab.com/biomodlih/sbm-for-correlation-based-networks and https://gitlab.com/kabaum/sbm-for-correlation-based-networks.
More information
- DOI: 10.5281/zenodo.3363060
- Language: en
Subjects
- biomolecular networks, edge relevance, missing and spurious edges, network-based omics analysis, weighted stochastic block model
Dates
- Publication date: 2019
- Issued: August 08, 2019
Notes
Other: {"references": ["Budczies J, Brockmoller SF, et al. (2013). Comparative metabolomics of estrogen receptor positive and estrogen receptor negative breast cancer: alterations in glutamine and beta-alanine metabolism. J Proteomics. 2013;94:279-88.", "Peixoto TP (2014). The graph-tool python library. 10.6084/m9.figshare.1164194", "Langfelder P, Horvath S. WGCNA (2008): an R package for weighted correlation network analysis. BMC Bioinformatics, 9:559."]}Rights
- https://creativecommons.org/licenses/by/4.0/legalcode Creative Commons Attribution 4.0 International
- info:eu-repo/semantics/openAccess Open Access
Format
electronic resource
Relateditems
| Description | Item type | Relationship | Uri |
|---|---|---|---|
| IsVersionOf | https://doi.org/10.5281/zenodo.2586674 | ||
| IsPartOf | https://zenodo.org/communities/zenodo |