Title: Yam genomics supports West Africa as a major cradle of crop domestication

Type Dataset Scarcelli, Nora, Cubry, Philippe, Akakpo, Roland, Thuillet, Anne-Céline, Obidiegwu, Jude, Baco, Mohamed Nasser, Otoo, Emmanuel, Sonké, Bonaventure, Dansi, Alexandre, Djedatin, Gustave, Mariac, Cédric, Couderc, Marie, Causse, Sandrine, Alix, Karine, Chaïr, Hâna, François, Olivier, Vigouroux, Yves (2019): Yam genomics supports West Africa as a major cradle of crop domestication. Zenodo. Dataset. https://zenodo.org/record/2540773

Authors: Scarcelli, Nora (IRD) ; Cubry, Philippe (IRD) ; Akakpo, Roland (IRD) ; Thuillet, Anne-Céline (IRD) ; Obidiegwu, Jude (NRCRI) ; Baco, Mohamed Nasser (University Parakou) ; Otoo, Emmanuel (CSIR) ; Sonké, Bonaventure (University Yaoundé I) ; Dansi, Alexandre (University Abomey) ; Djedatin, Gustave (University Abomey) ; Mariac, Cédric (IRD) ; Couderc, Marie (IRD) ; Causse, Sandrine (Cirad) ; Alix, Karine (AgroParisTech) ; Chaïr, Hâna (Cirad) ; François, Olivier (University Grenoble) ; Vigouroux, Yves (IRD) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

167 yam samples were fully resequenced (WGS, Illumina HiSeq) and mapped (BWA) to the Dioscorea rotundata genome (BDMI01000001.1 to BDMI01000021.1). Calling_ALL_Rotundata_Allc05.vcf.gz  is the result of the SNP calling (GATK). See associated publication for details;

More information

• DOI: 10.5281/zenodo.2540773

Dates

• Publication date: 2019
• Issued: May 03, 2019

Rights

• https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode Creative Commons Attribution Non Commercial Share Alike 4.0 International
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

Relateditems