Title: eADAGE-1.0.0rc2

Type Software Tan, Jie, Doing, Georgia, Lewis, Kimberley A., Price, Courtney E., Chen, Katheleen M., Cady, Kyle C., Perchuk, Barret, Laub, Michael T., Hogan, Deborah A., Greene, Casey S. (2016): eADAGE-1.0.0rc2. Zenodo. Software. https://zenodo.org/record/167467

Authors: Tan, Jie (Geisel School of Medicine at Dartmouth) ; Doing, Georgia (Geisel School of Medicine at Dartmouth) ; Lewis, Kimberley A. (Geisel School of Medicine at Dartmouth) ; Price, Courtney E. (Geisel School of Medicine at Dartmouth) ; Chen, Katheleen M. (Perelman School of Medicine, University of Pennsylvania) ; Cady, Kyle C. (Department of Biology, Massachusetts Institute of Technology) ; Perchuk, Barret (Department of Biology, Massachusetts Institute of Technology) ; Laub, Michael T. (Department of Biology, Massachusetts Institute of Technology) ; Hogan, Deborah A. (Geisel School of Medicine at Dartmouth) ; Greene, Casey S. (Perelman School of Medicine, University of Pennsylvania) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

This is the source code required to reproduce data analysis figures from the manuscript, "System-wide automatic extraction of functional signatures in Pseudomonas aeruginosa with eADAGE." This includes the eADAGE method as well as code for the comparison methods.

More information

• DOI: 10.5281/zenodo.167467

Subjects

• bioinformatics, systems biology, gene expression, denoising autoencoder, ensemble

Dates

• Publication date: 2016
• Issued: November 18, 2016

Rights

• https://opensource.org/licenses/BSD-3-Clause BSD 3-Clause "New" or "Revised" License
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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