Title: simulated rice data for avi

Type Dataset Smith-Unna, Richard (2015): simulated rice data for avi. Zenodo. Dataset. https://zenodo.org/record/15051

Author: Smith-Unna, Richard (University of Cambridge) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

4 million paired-end reads were simulated from the Oryza sativa ssp. japonica genome using the ENSEMBL v25 annotation. The reads were assembled using soapdenovo-trans with default settings. The assembly was assessed with transrate. The file contains the reads, the set of reference transcripts that reads were simulated from, the assembled contigs, and the subset of assembled contigs that had transrate contig scores of >= 0.5.

More information

• DOI: 10.5281/zenodo.15051

Dates

• Publication date: 2015
• Issued: February 11, 2015

Rights

• https://creativecommons.org/publicdomain/zero/1.0/legalcode Creative Commons Zero v1.0 Universal
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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