Title: Size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis (code and data)

Type Software Andreia Sofia Teixeira, Pedro T Monteiro, João A Carriço, Mário Ramirez, Alexandre P Francisco (2014): Size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis (code and data). Zenodo. Software. https://zenodo.org/record/13324

Authors: Andreia Sofia Teixeira (INESC-ID/IST, Universidade de Lisboa) ; Pedro T Monteiro (INESC-ID/IST, Universidade de Lisboa) ; João A Carriço (UMMI, IMM/Faculdade de Medicina, Universidade de Lisboa) ; Mário Ramirez (UMMI, IMM/Faculdade de Medicina, Universidade de Lisboa) ; Alexandre P Francisco (INESC-ID/IST, Universidade de Lisboa) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

Code and data used in our study "Not seeing the forest for the trees: Size of the minimum spanning trees (MSTs) forest and branch significance in MST-based phylogenetic analysis". The original development repository is available at https://bitbucket.org/phyloviz/popsim-analysis. MLST datasets included for testing and experiments were retrieved on 2014-06-24 from MLST.net, PubMLST.org and Institute Pasteur, where more recent versions can be found.

More information

• DOI: 10.5281/zenodo.13324

Subjects

• edge spanning betweenness, counting minimum spanning trees (MSTs), phylogenetic analysis, network analysis

Dates

• Publication date: 2014
• Issued: December 19, 2014

Rights

• https://opensource.org/licenses/GPL-3.0 GNU General Public License v3.0 only
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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