Title: flotilla: v0.2.3 (November 17th, 2014)
Type Software Olga Botvinnik, Michael Lovci, yanssbu, Leen (2014): flotilla: v0.2.3 (November 17th, 2014). Zenodo. Software. https://zenodo.org/record/12750
Links
- Item record in Zenodo
- Digital object URL
Summary
This is a patch release, with non-breaking changes from v0.2.2.
Compute functions Restore Study.detect_outliers Study.interactive_choose_outliers and Study.interactive_reset_outliers Plotting functions Add Study-level NMF space transitions/positions Bug Fixes embark wouldn't work if metadata didn't have a pooled column, now it does BaseData.drop_outliers would actually drop samples from the data, but we never want to remove data, only mark it as something to be removed so all the original data is there For all compute submodules, add a check to make sure the input data is truly a probability distribution (non-negative, sums to 1) BaseData.plot_feature now plots all features with the same name (e.g. all splicing events within that gene) onto a single fig object Documentation Restore some lost documentation on :py:class:.BaseData and :py:class:.Study Other Rename modalities that couldn't be assigned when bootstrapped=True in compute.splicing.Modalities, from "unassigned" to "ambiguous"More information
- DOI: 10.5281/zenodo.12750
Dates
- Publication date: 2014
- Issued: November 18, 2014
Rights
- info:eu-repo/semantics/openAccess Open Access
Format
electronic resource
Relateditems
| Description | Item type | Relationship | Uri |
|---|---|---|---|
| IsSupplementTo | https://github.com/YeoLab/flotilla/tree/v0.2.3 | ||
| IsVersionOf | https://doi.org/10.5281/zenodo.591617 | ||
| IsPartOf | https://zenodo.org/communities/zenodo |