Title: Processed NOMe-seq data for four human cell lines

Type Dataset Statham, Aaron Luke (2014): Processed NOMe-seq data for four human cell lines. Zenodo. Dataset. https://zenodo.org/record/12454

Author: Statham, Aaron Luke (Garvan Institute of Medical Research) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

Raw NOME-seq data (Gene Expression Omnibus accession GSE57498) for the human cell lines HMEC, MCF7, PrEC, PC3 were aligned to hg19 using bwa-meth. Methylation and occupancy calls were made at WCG and GCH sites respectively using bwa-meth, BisSNP and bespoke, tailor made scripts (https://github.com/astatham/NOMe-seq-analysis).

More information

• DOI: 10.5281/zenodo.12454

Subjects

• NOMe-seq, DNA methylation, Nucleosome Occupancy

Dates

• Publication date: 2014
• Issued: October 29, 2014

Rights

• https://creativecommons.org/licenses/by/4.0/legalcode Creative Commons Attribution 4.0 International
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

Relateditems