This is a limited proof of concept to search for research data, not a production system.

Search the MIT Libraries

Title: Simulated Human gut metagenomic samples to benchmark mOTUs v2

Type Dataset Milanese, Alessio, Mende, Daniel, Zeller, Georg, Sunagawa, Shinichi (2018): Simulated Human gut metagenomic samples to benchmark mOTUs v2. Zenodo. Dataset. https://zenodo.org/record/1244651

Authors: Milanese, Alessio (European Molecular Biology Laboratory) ; Mende, Daniel (University of Hawai'i at Manoa) ; Zeller, Georg (European Molecular Biology Laboratory) ; Sunagawa, Shinichi (ETH Zurich) ;

Links

Summary

We simulated five human gut metagenomic samples to assess the taxonomic quantification accuracy of the mOTUs tool (link). In this directory you can find the metagenomic samples, the gold standard (used to produce them) and the profiles obtained with three metagenomic profiler tools.

Check README.txt for more information.

NOTE: Version1 is obsolete, the files used in the paper are in Version2.

More information

  • DOI: 10.5281/zenodo.1244651

Dates

  • Publication date: 2018
  • Issued: June 15, 2018

Rights


Much of the data past this point we don't have good examples of yet. Please share in #rdi slack if you have good examples for anything that appears below. Thanks!

Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsVersionOfhttps://doi.org/10.5281/zenodo.1244650
IsPartOfhttps://zenodo.org/communities/zenodo