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Title: transrate: v1.0.0 alpha 3

Type Software Richard Smith-Unna, cboursnell (2014): transrate: v1.0.0 alpha 3. Zenodo. Software. https://zenodo.org/record/12285

Authors: Richard Smith-Unna (University of Cambridge) ; cboursnell ;

Links

Summary

Some minor changes and bug-fixes:

avoid re-running stages of the read-processing if their output files already exist add timestamp to logger #94 print help message when transrate is run with no arguments #93 transrate now reports the version number for missing dependencies fix samtools sort threads argument #96 help message updated to include transrate score example and both authors updated coverage calculation fix a segfault in bam-read (https://github.com/cboursnell/transrate-bam-read/commit/8fec0e9fe1fd49878a644fd1755ebd97e4bc1931, #98)

More information

  • DOI: 10.5281/zenodo.12285

Dates

  • Publication date: 2014
  • Issued: October 18, 2014

Rights

  • info:eu-repo/semantics/openAccess Open Access

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Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsSupplementTohttps://github.com/Blahah/transrate/tree/1.0.0.alpha3
IsVersionOfhttps://doi.org/10.5281/zenodo.591478
IsPartOfhttps://zenodo.org/communities/zenodo