Title: microPIECE (microRNA pipeline enhanced by CLIP experiments)

Type Software Amsel, Daniel, Billion, André, Vilcinskas, Andreas, Förster, Frank (2018): microPIECE (microRNA pipeline enhanced by CLIP experiments). Zenodo. Software. https://zenodo.org/record/1188481

Authors: Amsel, Daniel (Fraunhofer Institute for Molecular Biology and Applied Ecology, Department of Bioresources, Winchester Str. 2, 35394 Giessen, Germany) ; Billion, André (Fraunhofer Institute for Molecular Biology and Applied Ecology, Department of Bioresources, Winchester Str. 2, 35394 Giessen, Germany) ; Vilcinskas, Andreas (Fraunhofer Institute for Molecular Biology and Applied Ecology, Department of Bioresources, Winchester Str. 2, 35394 Giessen, Germany;Institute for Insect Biotechnology, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany) ; Förster, Frank (Fraunhofer Institute for Molecular Biology and Applied Ecology, Department of Bioresources, Winchester Str. 2, 35394 Giessen, Germany) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

The microPIECE (microRNA pipeline enhanced by CLIP experiments) takes the AGO-CLIP data from a speciesA and transfers it to a speciesB. Given a set of miRNAs from speciesB it then predicts their targets on the transfered CLIP regions.

More information

• DOI: 10.5281/zenodo.1188481

Dates

• Publication date: 2018
• Issued: March 05, 2018

Notes

Rights

• https://opensource.org/licenses/GPL-2.0 GNU General Public License v2.0 only
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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