Title: ctmixtures: Corrected Moran mutation rate

Type Software Mark E. Madsen, Ben Marwick (2014): ctmixtures: Corrected Moran mutation rate. Zenodo. Software. https://zenodo.org/record/11846

Authors: Mark E. Madsen (University of Washington) ; Ben Marwick (University of Washington) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

Calibrated the infinite alleles mutation rate (for all locus neutral copying) against Ewens 2004. Single locus copying yields more alleles than expected for the Moran process in the population, since copying events are necessary to weed out variants to the expected level. This model is suitable for single-locus copying model comparisons, which is sufficient for the current experiment. Needs a "all locus" interpretation of frequency-dependent biased copying, but there are difficulties in interpreting this (see lab notebook).

More information

• DOI: 10.5281/zenodo.11846

Dates

• Publication date: 2014
• Issued: September 23, 2014

Rights

• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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