This is a limited proof of concept to search for research data, not a production system.

Search the MIT Libraries

Title: Growth temperatures for 21,498 microorganisms

Type Dataset Engqvist, Martin Karl Magnus (2018): Growth temperatures for 21,498 microorganisms. Zenodo. Dataset. https://zenodo.org/record/1175609

Authors: Engqvist, Martin Karl Magnus (Chalmers University of Technology) ; Engqvist, Martin Karl Magnus (Chalmers University of Technology) ;

Links

Summary

This dataset contains species names and growth temperatures for 21,498 microorganisms (archaea, bacteria and eukaryotes). The dataset has been described in a peer-reviewed paper (https://doi.org/10.1186/s12866-018-1320-7), please cite both the paper as well as the DOI of this dataset if you make use of the data.

 

The data in the .tsv flat-file file is tab-delimited. Strain designations have explicitly been removed from the species names. Temperatures are given in degrees Celsius. Additional information given for each strain include: which domain (superkingdom) the organism belongs to, the organisms taxonomic identifier, taxonomic lineage as text, as well as the taxonomic lineage parsed into the categories superkingdom phylum, class, order, family, genus. Taxonomy is based on the NCBI taxonomic database, which is not authoritative, and may therefore contain errors. Missing values are indicated by NA.

More information

  • DOI: 10.5281/zenodo.1175609
  • Language: en

Subjects

  • growth temperature, domain of unknown function, metabolism, metabolic adaptation, enzyme, bacteria, archaea

Dates

  • Publication date: 2018
  • Issued: February 26, 2018

Notes

Other: {"references": ["https://doi.org/10.1186/s12866-018-1320-7"]}

Rights


Much of the data past this point we don't have good examples of yet. Please share in #rdi slack if you have good examples for anything that appears below. Thanks!

Format

electronic resource

Relateditems

DescriptionItem typeRelationshipUri
IsCitedByhttps://doi.org/10.1101/271569
IsCitedByhttps://doi.org/10.1186/s12866-018-1320-7
IsVersionOfhttps://doi.org/10.5281/zenodo.1175608
IsPartOfhttps://zenodo.org/communities/zenodo