Title: Irreproducible Discovery Rate(IDR) GPU version

Type Software Nikhil R Podduturi, J. Seth Strattan, J. Michael Cherry (2014): Irreproducible Discovery Rate(IDR) GPU version. Zenodo. Software. https://zenodo.org/record/10909

Authors: Nikhil R Podduturi (Stanford University) ; J. Seth Strattan (Stanford University) ; J. Michael Cherry (Stanford University) ;

Links

• Item record in Zenodo
• Digital object URL

Summary

idr-GPU is CUDA implementation of existing IDR software. The original software is written in R and maintained by Anshul Kundaje. Link for the CPU code - https://sites.google.com/site/anshulkundaje/projects/idr

The primary use of this software is to measure the reproducibility of findings identified from replicate high throughput experiments and provide highly stable thresholds based on reproducibility.

More information

• DOI: 10.5281/zenodo.10909

Subjects

• IDR

Dates

• Publication date: 2014
• Issued: July 17, 2014

Rights

• https://opensource.org/licenses/GPL-2.0 GNU General Public License v2.0 only
• info:eu-repo/semantics/openAccess Open Access

Format

electronic resource

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