Title: Microbial eukaryotic focused metatranscriptome data from seawater collected in coastal California in May of 2015

Type Dataset Caron, David, Hu, Sarah K (2020-05-11): Microbial eukaryotic focused metatranscriptome data from seawater collected in coastal California in May of 2015. Biological and Chemical Oceanography Data Management Office (BCO-DMO). Contact: bco-dmo-data@whoi.edu. Dataset. https://darchive.mblwhoilibrary.org/handle/1912/25760

Authors: Caron, David ; Hu, Sarah K ;

Links

• Item record in Woods Hole Open Access Server
• Digital object URL

Summary

Seawater was collected via Niskin bottles mounted with a CTD from the San Pedro Ocean Time-series (SPOT) station off the coast of Southern California near the surface (5 m), 150 and 890 m, in late May 2015. Raw sequence data was generated as part of a metatranscriptome study targeting the protistan community. Raw sequences are available at the National Center for Biotechnology Information (NCBI) Sequence Read Archive (SRA) database (SRA Study ID: SRP110974, BioProject: PRJNA391503). Sequences for BioProject PRJNA608423 will be available at NCBI on Jan 1st, 2021. These data were published in Hu et al. (2018). For a complete list of measurements, refer to the full dataset description in the supplemental file 'Dataset_description.pdf'. The most current version of this dataset is available at: https://www.bco-dmo.org/dataset/745518

More information

• URI: https://hdl.handle.net/1912/25760
• DOI: 10.26008/1912/bco-dmo.745518.2
• Language: en_US

Subjects

• Microbial ecology, Microbial eukaryotes, Metatranscriptomics, Protistan trophic strategies, Microbial eukaryotic metatranscriptomics

Dates

• accessioned: May 11, 2020
• available: May 11, 2020
• created: October 15, 2018
• Publication date: May 11, 2020
• coverage: Note: 20150520 - 20150520 (UTC)

Notes

Rights

• Creative Commons Attribution 4.0
• https://creativecommons.org/licenses/by/4.0/

Funding Information

Format

electronic resource

Locations

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